Ecommerce Bookkeeping for Amazon and Shopify Sellers – What You Need to Know

Selling online is exciting-but keeping your ecommerce books clean can be a nightmare. Between Amazon fees, Shopify payouts, returns, and taxes, it’s easy to lose track of profitability. That’s where professional ecommerce bookkeeping comes in.

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Key Challenges for Amazon and Shopify Sellers

  • Tracking gross vs net revenue after platform fees
  • Matching deposits to actual daily sales
  • Handling refunds, chargebacks, and adjustments
  • Calculating inventory and COGS accurately
  • Managing multi-channel sales and taxes

Test Case

An apparel brand selling on Shopify and Amazon hired us for monthly bookkeeping. Within 60 days:

  • We discovered $5,400 in unrecorded returns
  • Standardized fee reporting across platforms
  • Delivered clean P&Ls segmented by channel

Tax & Compliance Context

Ecommerce platforms issue 1099-Ks, but they often:

  • Combine gross sales with refunds and adjustments
  • Don’t clearly show fees or chargebacks

Proper bookkeeping ensures:

  • Accurate sales tax tracking
  • Deductible COGS
  • Reliable cash flow reporting

Need help organizing your Amazon and Shopify financials? See our ecommerce bookkeeping services.

Ecommerce Bookkeeping for Amazon & Shopify Sellers Across States

Ecommerce Bookkeeping for Amazon & Shopify Sellers Across Key ZIPs

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FAQs

Can you track revenue by platform?

Yes. We separate and report Amazon vs Shopify income and expenses.

Do you handle inventory and COGS tracking?

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Yes. We reconcile inventory purchases and cost-of-goods data monthly.

What about refunds and platform fees?

We break them out clearly so your financials reflect true profitability.

Let RemoteBooksOnline turn your ecommerce chaos into clean, reliable books.

Book your ecommerce bookkeeping consultation

Streamline Your Finances: Download Our Free Bookkeeping Brochure

Take control of your business finances with confidence! Our detailed brochure provides insights into how Remote Books Online can help you maintain accurate bookkeeping, stay tax-ready, and make informed financial decisions. Discover how our tailored bookkeeping services can support your business growth and simplify your financial management.