Nonprofit Bookkeeping Services – Trusted by 501(c)(3)s Nationwide
Accurate, affordable, and audit-ready bookkeeping tailored for nonprofits of all sizes.
Request a QuoteRemoteBooksOnline provides CPA-reviewed bookkeeping services tailored for nonprofit organizations. Whether you’re managing donor funds, tracking grants, or preparing for your next audit, we deliver clean financials, every month - all with flat-rate pricing and zero stress.
Why Nonprofits Choose Us
Categorize donations, grants, and restricted funds accurately
Prepare board-ready financial reports
Maintain compliance with IRS and state regulations
Support for QuickBooks and fund accounting setups
No contracts. No setup fees. Fully remote.
Start your first month free – No contracts. No surprises.
Who We Serve
501(c)(3) nonprofits- Foundations and charitable organizations
- Arts, education, environmental, advocacy, and social services orgs
- National and community-based nonprofits
Client Reviews
We support business owners across the country with reliable, remote bookkeeping. Here’s what a few of them say:
Perfect for remote teams and distributed boards
Olivia M, Board Chair
Professional, nonprofit-savvy, and fast. Highly recommend
Claire D, Development Director
They helped us clean up 18 months of backlogs and prepare for our first audit
Sarah M, CFO
Frequently Asked Questions
Is your service remote or local to nationwide?
Fully remote. We support nonprofits nationwide and across the U.S.
Do you support payroll or donations via platforms like Stripe or Donorbox?
Yes. We integrate with common payment platforms and track incoming donor revenue accurately.
Is my data secure?
Yes — we use encrypted file portals and bank-level cloud security.
Can you track restricted funds and grants?
Absolutely. We categorize donations, grants, and restrictions using fund accounting principles.
Do you provide nonprofit bookkeeping nationwide?
Yes. We support nonprofits in and around nationwide with CPA-reviewed monthly bookkeeping.
Are you experienced with nonprofit chart of accounts?
Yes. We’ve worked with hundreds of nonprofits and configure the chart to fit your structure.
What software do you support?
We work with QuickBooks Online and Desktop, and can assist with nonprofit-friendly configurations.
Do you provide CPA-reviewed monthly reports?
Yes. All monthly financials are CPA-reviewed before delivery.
Is there a contract or setup fee?
No contracts. No setup fees. Cancel anytime.
Can we outsource just a portion of our bookkeeping?
Yes. We can handle reconciliations, reporting, or the entire workflow.
See more answers in our full Nonprofit Bookkeeping Services FAQ →
Helpful Articles for Nonprofit Bookkeeping
Explore nonprofit-specific guides for tracking grants, board reporting, and IRS compliance:
- Nonprofit Bookkeeping - Why Mission-Driven Organizations Still Need Accurate Financials
- How to Track Restricted and Unrestricted Funds in a Nonprofit
- What to Include in a Monthly Nonprofit Financial Report
- How to Prepare for a Nonprofit Audit with Clean Books
- The Real Cost of DIY Bookkeeping for Small Business Owners
Learn More About What We Offer
- Catch-Up Bookkeeping Services
- Monthly Bookkeeping Services
- Affordable Pricing Plans
- Nonprofit Bookkeeping – Why Mission-Driven Organizations
- How to Track Restricted and Unrestricted Funds in a Nonprofit
- What to Include in a Monthly Nonprofit Financial Report
- How to Prepare for a Nonprofit Audit with Clean Books
- White-Label Bookkeeping Services
Start your first month free – No contracts. No surprises.
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Why Small Businesses Trust RemoteBooksOnline
Trusted by 1000+ business owners and 300+ firms 
CPA-reviewed accuracy 
Flat monthly pricing Our medical and dental bookkeeping ensures HIPAA-compliant financials and simplified insurance reconciliation.
Our bookkeeping services near you help nonprofits stay donor-ready, audit-compliant, and financially organized.
Tax professionals and CPAs rely on our QuickBooks bookkeeping services to streamline financials and scale their practices efficiently.