Nonprofit Bookkeeping Services – Trusted by 501(c)(3)s Nationwide
Accurate, affordable, and audit-ready bookkeeping tailored for nonprofits of all sizes.
Request a QuoteRemoteBooksOnline provides CPA-reviewed bookkeeping services tailored for nonprofit organizations. Whether you’re managing donor funds, tracking grants, or preparing for your next audit, we deliver clean financials, every month - all with flat-rate pricing and zero stress.
Why Nonprofits Choose Us
Categorize donations, grants, and restricted funds accurately
Prepare board-ready financial reports
Maintain compliance with IRS and state regulations
Support for QuickBooks and fund accounting setups
No contracts. No setup fees. Fully remote.
Start your first month free – No contracts. No surprises.
Who We Serve
501(c)(3) nonprofits- Foundations and charitable organizations
- Arts, education, environmental, advocacy, and social services orgs
- National and community-based nonprofits
Client Reviews
We support business owners across the country with reliable, remote bookkeeping. Here’s what a few of them say:
They walked us through every step of the cleanup process, and didn’t nickel-and-dime us
Greg H, Accounting Manager
Great for organizations with multiple programs or restricted grants
David P, Operations Manager
They helped us clean up 18 months of backlogs and prepare for our first audit
Sarah M, CFO
Frequently Asked Questions
Yes, we use encrypted file portals and bank-level cloud security.
Yes. We’ve worked with hundreds of nonprofits and configure the chart to fit your structure.
Onboarding typically begins within 48 hours of signup.
Yes. All monthly financials are CPA-reviewed before delivery.
Yes. We support nonprofits in and around nationwide with CPA-reviewed monthly bookkeeping.
Yes. We can handle reconciliations, reporting, or the entire workflow.
Yes. We offer catch-up and cleanup services, including back years if needed.
No contracts. No setup fees. Cancel anytime.
Yes. We integrate with common payment platforms and track incoming donor revenue accurately.
Yes. Whether you're a brand new 501(c)(3) or a large national org, we adjust to fit your needs.
See more answers in our full Nonprofit Bookkeeping Services FAQ →
Helpful Articles for Nonprofit Bookkeeping
Explore nonprofit-specific guides for tracking grants, board reporting, and IRS compliance:
- Nonprofit Bookkeeping - Why Mission-Driven Organizations Still Need Accurate Financials
- How to Track Restricted and Unrestricted Funds in a Nonprofit
- What to Include in a Monthly Nonprofit Financial Report
- How to Prepare for a Nonprofit Audit with Clean Books
- The Real Cost of DIY Bookkeeping for Small Business Owners
Learn More About What We Offer
- Catch-Up Bookkeeping Services
- Monthly Bookkeeping Services
- Affordable Pricing Plans
- Nonprofit Bookkeeping – Why Mission-Driven Organizations
- How to Track Restricted and Unrestricted Funds in a Nonprofit
- What to Include in a Monthly Nonprofit Financial Report
- How to Prepare for a Nonprofit Audit with Clean Books
- White-Label Bookkeeping Services
Start your first month free – No contracts. No surprises.
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Why Small Businesses Trust RemoteBooksOnline
Trusted by 1000+ business owners and 300+ firms 
CPA-reviewed accuracy 
Flat monthly pricing Our medical and dental bookkeeping ensures HIPAA-compliant financials and simplified insurance reconciliation.
Our bookkeeping services near you help nonprofits stay donor-ready, audit-compliant, and financially organized.
Tax professionals and CPAs rely on our QuickBooks bookkeeping services to streamline financials and scale their practices efficiently.