Bookkeeping Services for Amazon and Shopify Sellers, CPA-Reviewed, Flat-Rate
Ecommerce bookkeeping done for you - accurate, timely, sales-tax-ready.
At a glance: Amazon & Shopify payout reconciliation • Fees/returns/chargebacks mapping • COGS & inventory (SKU-level) • Sales-tax support (multi-state) • A/R & A/P • Month-end close & CPA review • QuickBooks & Xero support • Flat-rate monthly
Request a QuoteBookkeeping for Amazon and Shopify Sellers, Stay Synced, Scalable, and Sales-Tax Compliant
We use AI-assisted categorization and reconciliation to map marketplace fees/returns, speed payout matching, and flag anomalies, then a CPA reviews every month-end report.
E-commerce bookkeeping isn’t just about tracking revenue, it’s about reconciling multiple payment gateways, fees, returns, sales tax liabilities, and inventory across platforms like Amazon and Shopify. RemoteBooksOnline delivers flat-rate, CPA-reviewed bookkeeping specifically designed for sellers managing orders, payouts, and marketplace integrations. Whether you're fulfilling from your garage or scaling a multi-brand DTC empire, our team ensures your financials stay accurate, tax-ready, and investor-friendly, month after month, without the guesswork. Get clean books, detailed reports, and full visibility into your e-commerce performance with no hourly billing or software learning curves.
Why Sellers Choose Us
Reconcile Amazon and Shopify payouts
Track COGS, shipping, returns, fees, and inventory
Sales tax prep support across states
CPA-reviewed financials delivered monthly
QuickBooks Online & Desktop support included
Start your first month free - marketplace-ready, CPA-reviewed, fully remote.
Who We Serve
Amazon FBA and FBM sellers- Shopify store owners
- Etsy, Walmart, and eBay sellers (multi-channel support)
- U.S.-based and international sellers doing business in the U.S.
How Our Ecommerce Bookkeeping Works
Free Quote
Share channel mix, order volume, and goals. Get a flat-rate plan.
Secure Connect
Connect Amazon, Shopify, and banks; import settlements & orders.
Map & Reconcile
Map fees/returns/tax, post COGS & inventory, reconcile payouts.
Close & Report
Month-end close, management reports, and CPA review every month.
Client Reviews
We support business owners across the country with reliable, remote bookkeeping. Here’s what a few of them say:
They understand marketplace bookkeeping. Huge win for sellers.
Lee C, Operations Director
Perfect for solo sellers and scaling DTC brands alike.
Clark M, E-commerce Entrepreneur
Flat pricing and fast answers, great for growing brands.
Robinson S, Brand Strategist
Frequently Asked Questions
Yes. We support seller sales tax tracking across all 50 states.
Most clients are onboarded within 48 hours.
Yes. We categorize and reconcile all return-related activity properly.
We prepare sales data summaries by state and coordinate with your tax solution or CPA for filings.
Yes. We adapt reporting based on your fulfillment method.
No. Flat-rate only, with month-to-month service.
Yes. We support U.S.-based sellers and international sellers operating in the U.S.
Yes. Monthly P&L and Balance Sheets are included and CPA-reviewed.
Yes. We help Amazon and Shopify sellers nationwide with full bookkeeping support.
We offer catch-up bookkeeping and reconciliation for all prior years.
See more answers in our full Bookkeeping Services for Amazon and Shopify Sellers FAQ →
Trusted by Sellers Nationwide
We support Amazon and Shopify sellers in all 50 states - and beyond.
Start your first month free - marketplace-ready, CPA-reviewed, fully remote.
Featured Insights
See how virtual bookkeeping works, where it’s growing, and why businesses are choosing CPA-reviewed support.
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Why Small Businesses Trust RemoteBooksOnline
Trusted by 5000+ business owners and 300+ firms 
CPA-reviewed accuracy 
Flat monthly pricing Our medical and dental bookkeeping ensures HIPAA-compliant financials and simplified insurance reconciliation.
Our bookkeeping services near you help nonprofits stay donor-ready, audit-compliant, and financially organized.
Tax professionals and CPAs rely on our QuickBooks bookkeeping services to streamline financials and scale their practices efficiently.
Want a flat-rate, affordable option for eCommerce? See our affordability guide.